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Add warning to MakePom for intransitive dependencies.
Intransitive does not work in Maven, and does not translate to pom.xml.
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[@jsuereth]: http://github.com/jsuereth
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### Fixes with compatibility implications
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### Improvements
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- makePom now warns when it sees intransitive dependencies, which do not translate to Maven. by [@jsuereth][@jsuereth]
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### Bug fixes
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