diff --git a/.gitignore b/.gitignore
index 46f5b7be..9b071905 100644
--- a/.gitignore
+++ b/.gitignore
@@ -55,6 +55,11 @@ extcheck/Makefile
 net2ir/Makefile
 graphics/Makefile
 oa/Makefile
+magic/Makefile
+tcltk/Makefile
+scmos/Makefile
+doc/Makefile
+lisp/Makefile
 
 # Compiled objects / libraries
 *.o
diff --git a/doc/Makefile b/doc/Makefile.in
similarity index 100%
rename from doc/Makefile
rename to doc/Makefile.in
diff --git a/lisp/Makefile b/lisp/Makefile.in
similarity index 100%
rename from lisp/Makefile
rename to lisp/Makefile.in
diff --git a/magic/Makefile b/magic/Makefile.in
similarity index 100%
rename from magic/Makefile
rename to magic/Makefile.in
diff --git a/scmos/Makefile b/scmos/Makefile.in
similarity index 100%
rename from scmos/Makefile
rename to scmos/Makefile.in
diff --git a/scripts/configure b/scripts/configure
index 0404abd0..bb2948f4 100755
--- a/scripts/configure
+++ b/scripts/configure
@@ -9469,6 +9469,16 @@ ac_config_files="$ac_config_files graphics/Makefile:graphics/Makefile.in"
 
 ac_config_files="$ac_config_files oa/Makefile:oa/Makefile.in"
 
+ac_config_files="$ac_config_files magic/Makefile:magic/Makefile.in"
+
+ac_config_files="$ac_config_files tcltk/Makefile:tcltk/Makefile.in"
+
+ac_config_files="$ac_config_files scmos/Makefile:scmos/Makefile.in"
+
+ac_config_files="$ac_config_files doc/Makefile:doc/Makefile.in"
+
+ac_config_files="$ac_config_files lisp/Makefile:lisp/Makefile.in"
+
 
 if test "`cd $srcdir && pwd`" = "`pwd`" ; then
   magic_config_header=magic/autoconf/config.h
@@ -10233,6 +10243,11 @@ do
     "net2ir/Makefile") CONFIG_FILES="$CONFIG_FILES net2ir/Makefile:net2ir/Makefile.in" ;;
     "graphics/Makefile") CONFIG_FILES="$CONFIG_FILES graphics/Makefile:graphics/Makefile.in" ;;
     "oa/Makefile") CONFIG_FILES="$CONFIG_FILES oa/Makefile:oa/Makefile.in" ;;
+    "magic/Makefile") CONFIG_FILES="$CONFIG_FILES magic/Makefile:magic/Makefile.in" ;;
+    "tcltk/Makefile") CONFIG_FILES="$CONFIG_FILES tcltk/Makefile:tcltk/Makefile.in" ;;
+    "scmos/Makefile") CONFIG_FILES="$CONFIG_FILES scmos/Makefile:scmos/Makefile.in" ;;
+    "doc/Makefile") CONFIG_FILES="$CONFIG_FILES doc/Makefile:doc/Makefile.in" ;;
+    "lisp/Makefile") CONFIG_FILES="$CONFIG_FILES lisp/Makefile:lisp/Makefile.in" ;;
 
   *) as_fn_error $? "invalid argument: \`$ac_config_target'" "$LINENO" 5;;
   esac
diff --git a/scripts/configure.in b/scripts/configure.in
index eb0a120b..ed129d7a 100644
--- a/scripts/configure.in
+++ b/scripts/configure.in
@@ -2040,6 +2040,11 @@ AC_CONFIG_FILES([extcheck/Makefile:extcheck/Makefile.in])
 AC_CONFIG_FILES([net2ir/Makefile:net2ir/Makefile.in])
 AC_CONFIG_FILES([graphics/Makefile:graphics/Makefile.in])
 AC_CONFIG_FILES([oa/Makefile:oa/Makefile.in])
+AC_CONFIG_FILES([magic/Makefile:magic/Makefile.in])
+AC_CONFIG_FILES([tcltk/Makefile:tcltk/Makefile.in])
+AC_CONFIG_FILES([scmos/Makefile:scmos/Makefile.in])
+AC_CONFIG_FILES([doc/Makefile:doc/Makefile.in])
+AC_CONFIG_FILES([lisp/Makefile:lisp/Makefile.in])
 
 dnl Emit an autoconf config header, available to the tree as
 dnl   #include <magic/autoconf/config.h>
diff --git a/tcltk/Makefile b/tcltk/Makefile.in
similarity index 100%
rename from tcltk/Makefile
rename to tcltk/Makefile.in